#NEXUS 

Begin trees;  [Treefile saved Tue Feb 13 14:57:54 2001]
[!
>Data file = D:\Susan\PAUP stuff\NEXUS files\ITS-veratrum-old.nex
>Heuristic search settings:
>  Optimality criterion = maximum parsimony
>    Character-status summary:
>      Of 649 total characters:
>        All characters are of type 'unord'
>        All characters have equal weight
>        152 characters are constant
>        365 variable characters are parsimony-uninformative
>        Number of parsimony-informative characters = 132
>    Multistate taxa interpreted as uncertainty
>  Starting tree(s) obtained via stepwise addition
>  Addition sequence: simple (reference taxon = V.mackii)
>  Number of trees held at each step during stepwise addition = 1
>  Branch-swapping algorithm: tree-bisection-reconnection (TBR)
>  Steepest descent option not in effect
>  Initial 'MaxTrees' setting = 38500 (will be auto-increased by 100)
>  Branches collapsed (creating polytomies) if maximum branch length is zero
>  'MulTrees' option in effect
>  Topological constraints not enforced
>  Trees are unrooted
>
>Heuristic search completed
>   Total number of rearrangements tried = 38663
>   Score of best tree(s) found = 748
>   Number of trees retained = 6
>   Time used = 0.82 sec
]
	Translate
		1 V.mackii,
		2 D.fargesii,
		3 D.polyphylla,
		4 D.thibetica,
		5 D.violacea,
		6 K.japonica,
		7 P.incompleta,
		8 P.tetraphylla,
		9 P.verticillata,
		10 T.camschatcense,
		11 T.chloropetalum,
		12 T.decipiens,
		13 T.discolor,
		14 T.erectum,
		15 T.govanianum,
		16 T.grandiflorum,
		17 T.lancifolium,
		18 T.maculatum,
		19 T.ovatum,
		20 T.petiolatum,
		21 T.pusillum,
		22 T.recurvatum,
		23 T.reliquum,
		24 T.rivale,
		25 T.rugelii,
		26 T.sessile,
		27 T.undulatum
		;
tree PAUP_1 = [&U] (1,((((((2,4),(3,5)),6),((7,8),9)),((10,(14,25)),((((11,17,18,20,22,26),(12,13,23)),((16,21),19)),(15,27)))),24));
tree PAUP_2 = [&U] (1,((((((2,4),(3,5)),6),((7,8),9)),((10,(14,25)),((((11,17,(18,26),20,22),(12,13,23)),((16,21),19)),(15,27)))),24));
tree PAUP_3 = [&U] (1,(((((((2,4),3),5),6),((7,8),9)),((10,(14,25)),((((11,17,18,20,22,26),(12,13,23)),((16,21),19)),(15,27)))),24));
tree PAUP_4 = [&U] (1,(((((2,((3,5),4)),6),((7,8),9)),((10,(14,25)),((((11,17,18,20,22,26),(12,13,23)),((16,21),19)),(15,27)))),24));
tree PAUP_5 = [&U] (1,(((((((2,4),3),5),6),((7,8),9)),((10,(14,25)),((((11,17,(18,26),20,22),(12,13,23)),((16,21),19)),(15,27)))),24));
tree PAUP_6 = [&U] (1,(((((2,((3,5),4)),6),((7,8),9)),((10,(14,25)),((((11,17,(18,26),20,22),(12,13,23)),((16,21),19)),(15,27)))),24));
End;