Trilliaceae Phylogeny: supporting data and source information
 |
Phylogenetic analyses of Trilliaceae
based on morphological and molecular data |
| Pseudotrillium rivale (S. Wats.) S. Farmer |
Note: all printable files are Microsoft Word documents; all "pretty print" files are Corel WordPerfect format. Right-click and save for the WordPerfect or Works files. Let me know if you experience any problems. |
| INPUT DATA | ||
|---|---|---|
| ITS data set | Nexus format Nexus format -- Veratrum as outgroup |
pretty print |
| matK data set | Nexus format Nexus format -- Veratrum as outgroup |
pretty print |
| Small Morphological data set | Nexus format | The data for the small morphological data set is the same as the large morphological data set with the exclusion of the taxa not represented by DNA sequences. |
| Combination data set -- (ITS, matK, small morphology) data sets | Nexus format | pretty print |
| Large morphological data set -- Thesis | Nexus format | pretty print |
| Large morphological data set -- Article | Nexus format | pretty print |
| TREE FILES | |||
|---|---|---|---|
| ITS | consensus printable consensus consensus with Veratrum |
maximum likelihood | printable bootstrap |
| matK | consensus printable consensus consensus with Veratrum |
maximum likelihood | printable bootstrap |
| small morphology | consensus printable consensus |
printable bootstrap | |
| ITS - matK | consensus printable consensus |
maximum likelihood | printable bootstrap |
| ITS - morphology | consensus printable consensus |
printable bootstrap | |
| matK - morph | consensus printable consensus |
printable bootstrap | |
| combo | consensus printable consensus |
printable bootstrap | |
| Large Morphological -- thesis | consensus | ||
| Large Morphological -- article | consensus | ||
| miscellaneous | All trees including the "test" tree printable set of all trees |
||
| SUPPORTING DATA | ||
|---|---|---|
| Character and state information | WordPerfect file describing each of the characters, the character states, and rationale/discussion. | |
| Sources for Paris s.l. | Microsoft Works format | Microsoft Excel format |
| Sources for Pedicellate Trillium | Microsoft Works format | Microsoft Excel format |
| Sources for Sessile-flowered Trillium | Microsoft Works format | Microsoft Excel format |