Trilliaceae Phylogeny: supporting data and source information

Phylogenetic analyses of Trilliaceae based on morphological and molecular data
Systematic Botany 27(4):674-692. 2002.
(PDF file)

Data matrices, trees, and supporting documentation

Pseudotrillium rivale (S. Wats.) S. Farmer

Note: all printable files are Microsoft Word documents; all "pretty print" files are Corel WordPerfect format. Right-click and save for the WordPerfect or Works files. Let me know if you experience any problems.

INPUT DATA
ITS data set Nexus format
Nexus format -- Veratrum as outgroup		 pretty print
matK data set Nexus format
Nexus format -- Veratrum as outgroup		 pretty print
Small Morphological data set Nexus format The data for the small morphological data set is the same as the large morphological data set with the exclusion of the taxa not represented by DNA sequences.
Combination data set -- (ITS, matK, small morphology) data sets Nexus format pretty print
Large morphological data set -- Thesis Nexus format pretty print
Large morphological data set -- Article Nexus format pretty print

TREE FILES
ITS consensus
printable consensus
consensus with Veratrum		 maximum likelihood

printable

 printable bootstrap
matK consensus
printable consensus
consensus with Veratrum		 maximum likelihood

printable

 printable bootstrap
small morphology consensus
printable consensus
printable bootstrap
ITS - matK consensus
printable consensus 		maximum likelihood

printable

 printable bootstrap
ITS - morphology consensus
printable consensus
printable bootstrap
matK - morph consensus
printable consensus
printable bootstrap
combo consensus
printable consensus
printable bootstrap
Large Morphological -- thesis consensus

Large Morphological -- article consensus

miscellaneous All trees including the "test" tree

printable set of all trees

SUPPORTING DATA
Character and state information WordPerfect file describing each of the characters, the character states, and rationale/discussion.
Sources for Paris s.l.

 Microsoft Works format Microsoft Excel format
Sources for Pedicellate Trillium Microsoft Works format Microsoft Excel format
Sources for Sessile-flowered Trillium Microsoft Works format Microsoft Excel format

More information on Trilliaceae.


last updated: 22 May 2004 sfarmer@goldsword.com

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